Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl phosphate-alpha-l-ara4n flippase subunit arnf | SK85_02512 | B7UFS1 | Positive | 2583677 - 2584063 | 14130.0 |
| signal transduction protein pmrd | SK85_02513 | P37590 | Negative | 2584057 - 2584323 | 9858.05 |
| 2-succinylbenzoate-coa ligase | SK85_02514 | P37353 | Negative | 2584433 - 2585788 | 50125.4 |
| o-succinylbenzoate synthase | SK85_02515 | Q0TFI0 | Negative | 2585785 - 2586747 | 35524.7 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SK85_02516 | P0ABU1 | Negative | 2586747 - 2587604 | 31634.9 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | SK85_02517 | B7MXU6 | Negative | 2587619 - 2588377 | 27674.8 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SK85_02518 | B7UFS7 | Negative | 2588374 - 2590044 | 61450.6 |
| menaquinone-specific isochorismate synthase | SK85_02519 | P38051 | Negative | 2590133 - 2591428 | 48751.3 |
| protein elab | SK85_02520 | P0AEH7 | Negative | 2591507 - 2591812 | 11306.3 |
| protein elaa | SK85_02521 | P0AEH3 | Negative | 2591867 - 2592328 | 17362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





