Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | SK85_02482 | P45508 | Negative | 2549889 - 2553593 | 129185.0 |
| ribonucleoside-diphosphate reductase 1 subunit alpha | SK85_02483 | P00452 | Positive | 2554337 - 2556622 | 85780.0 |
| ribonucleoside-diphosphate reductase 1 subunit beta | SK85_02484 | P69925 | Positive | 2556856 - 2557986 | 43549.6 |
| 2fe-2s ferredoxin | SK85_02485 | P0ABW4 | Positive | 2557986 - 2558240 | 9293.29 |
| protein inaa | SK85_02486 | P27294 | Negative | 2558495 - 2558944 | 17195.8 |
| hypothetical protein | SK85_02487 | P45505 | Positive | 2559159 - 2559365 | 7517.53 |
| glycerophosphoryl diester phosphodiesterase | SK85_02488 | P09394 | Negative | 2559407 - 2560483 | 40861.6 |
| glycerol-3-phosphate transporter | SK85_02489 | P08194 | Negative | 2560488 - 2561846 | 50313.2 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | SK85_02490 | P0A9C1 | Positive | 2562119 - 2563747 | 58961.7 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | SK85_02491 | C4ZU83 | Positive | 2563737 - 2564996 | 45359.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





