Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase subunit beta | SK85_02472 | P76459 | Positive | 2533581 - 2534231 | 22961.1 |
| short-chain fatty acids transporter | SK85_02473 | P76460 | Positive | 2534228 - 2535550 | 47546.6 |
| acetyl-coa acetyltransferase | SK85_02474 | P76461 | Positive | 2535581 - 2536765 | 40354.9 |
| hypothetical protein | SK85_02475 | P76462 | Negative | 2536839 - 2537615 | 28305.2 |
| hypothetical protein | SK85_02476 | P76463 | Negative | 2537620 - 2539269 | 61479.1 |
| alpha-2-macroglobulin family protein | SK85_02477 | P76464 | Negative | 2539270 - 2543664 | 162485.0 |
| hypothetical protein | SK85_02478 | P76466 | Negative | 2543808 - 2544431 | 23768.5 |
| hypothetical protein | SK85_02479 | P17994 | Negative | 2544428 - 2546116 | 62674.7 |
| dna gyrase subunit a | SK85_02480 | P0AES4 | Negative | 2546265 - 2548892 | 96969.3 |
| ubiquinone biosynthesis o-methyltransferase | SK85_02481 | A7ZP50 | Positive | 2549039 - 2549761 | 26557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





