Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SK85_01743 | Not Available | Negative | 1779900 - 1780181 | 10682.6 |
| Tail fiber protein | SK85_01744 | Not Available | Negative | 1780181 - 1782559 | 82893.9 |
| Outer membrane protein lom precursor | SK85_01745 | P03701 | Negative | 1782624 - 1783223 | 21828.1 |
| Putative tail tip assembly protein | SK85_01746 | Not Available | Negative | 1783293 - 1786790 | 127240.0 |
| Tail component | SK85_01747 | P03730 | Negative | 1786851 - 1787423 | 19433.4 |
| Tail fiber component | SK85_01748 | P03729 | Negative | 1787420 - 1788163 | 28218.3 |
| Tail component | SK85_01749 | P03738 | Negative | 1788168 - 1788866 | 25620.9 |
| Tail component | SK85_01750 | P03737 | Negative | 1788866 - 1789195 | 12503.0 |
| Tail component | SK85_01751 | Not Available | Negative | 1789192 - 1791771 | 93111.8 |
| Tail component | SK85_01752 | Not Available | Negative | 1791764 - 1792198 | 16122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





