Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthesis protein p47k | SK85_02422 | P33030 | Positive | 2477546 - 2478532 | 36115.3 |
| inner membrane protein yeiu | SK85_02423 | P76445 | Positive | 2478571 - 2479284 | 26760.7 |
| murein dd-endopeptidase meps/murein ld-carboxypeptidase | SK85_02424 | P0AFV6 | Positive | 2479696 - 2480262 | 21041.1 |
| protein rtn | SK85_02425 | P76446 | Positive | 2480443 - 2481999 | 58634.5 |
| oligopeptide transporter subunit | SK85_02426 | P33913 | Positive | 2482081 - 2483895 | 69672.6 |
| inner membrane abc transporter permease yejb | SK85_02427 | P0AFU1 | Positive | 2483896 - 2484990 | 40362.6 |
| inner membrane abc transporter permease yeje | SK85_02428 | P33915 | Positive | 2484990 - 2486015 | 38094.6 |
| oligopeptide abc transporter atp-binding protein | SK85_02429 | P33916 | Positive | 2486017 - 2487606 | 58729.8 |
| hypothetical protein | SK85_02430 | P0AD22 | Negative | 2487610 - 2487954 | 12525.9 |
| bicyclomycin resistance protein | SK85_02431 | P28246 | Negative | 2488287 - 2489477 | 43355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





