Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside transporter | SK85_02412 | P33024 | Negative | 2465802 - 2467052 | 43434.4 |
| pseudouridine-5'-phosphate glycosidase | SK85_02413 | P33025 | Negative | 2467146 - 2468084 | 32883.8 |
| pseudouridine kinase | SK85_02414 | P30235 | Negative | 2468072 - 2469013 | 33573.9 |
| pts system fructose-specific iibc component | SK85_02415 | P20966 | Negative | 2469436 - 2471127 | 57522.6 |
| 1-phosphofructokinase | SK85_02416 | P0AEX1 | Negative | 2471144 - 2472082 | 33757.6 |
| multiphosphoryl transfer protein | SK85_02417 | P69812 | Negative | 2472082 - 2473212 | 39650.2 |
| sugar efflux transporter b | SK85_02418 | P33026 | Positive | 2473580 - 2474761 | 42720.6 |
| hypothetical protein | SK85_02419 | P0AFT9 | Negative | 2474758 - 2475012 | 8954.96 |
| elongation factor p-like protein | SK85_02420 | A7ZNZ5 | Positive | 2475167 - 2475739 | 21533.9 |
| dehydrogenase, nad-dependent | SK85_02421 | P33029 | Positive | 2475962 - 2477428 | 54034.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





