Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-formylglutathione hydrolase yeig | SK85_02402 | B1X7P2 | Positive | 2453627 - 2454463 | 31260.9 |
| colicin i receptor | SK85_02403 | P17315 | Negative | 2454495 - 2456486 | 73899.5 |
| lysine-specific permease | SK85_02404 | P25737 | Negative | 2456780 - 2458249 | 53579.0 |
| transcriptional regulator | SK85_02405 | P0ACR6 | Negative | 2458454 - 2459260 | 29997.4 |
| inner membrane protein | SK85_02406 | P62724 | Positive | 2459434 - 2460483 | 36884.3 |
| endonuclease 4 | SK85_02407 | P0A6C2 | Positive | 2460557 - 2461414 | 31511.2 |
| pyrimidine kinase | SK85_02408 | P33020 | Positive | 2461417 - 2462505 | 39712.6 |
| nucleoside permease nupx | SK85_02409 | P33021 | Negative | 2462612 - 2463862 | 43412.3 |
| pyrimidine-specific ribonucleoside hydrolase rihb | SK85_02410 | A7ZNY5 | Negative | 2463962 - 2464903 | 33750.1 |
| regulatory protein yeil | SK85_02411 | P0A9F0 | Positive | 2465033 - 2465731 | 26888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





