Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | SK85_02382 | P06149 | Positive | 2431901 - 2433616 | 64615.9 |
| d-alanyl-d-alanine endopeptidase | SK85_02383 | P0AFI5 | Negative | 2433654 - 2434586 | 33889.4 |
| inner membrane protein yohc | SK85_02384 | P0AD18 | Negative | 2434760 - 2435347 | 21692.0 |
| inner membrane protein yohd | SK85_02385 | P33366 | Positive | 2435517 - 2436095 | 21445.9 |
| oxidoreductase with nad(p)-binding rossmann-fold | SK85_02386 | P33368 | Negative | 2436225 - 2436986 | 26980.5 |
| multidrug resistance outer membrane protein mdtq | SK85_02387 | Q83KF5 | Negative | 2437039 - 2438475 | 52169.9 |
| trna-dihydrouridine synthase c | SK85_02388 | P33371 | Negative | 2439155 - 2440102 | 35201.5 |
| holin-like protein | SK85_02389 | B7UFF7 | Positive | 2440341 - 2440739 | 14579.6 |
| inner membrane protein yohk | SK85_02390 | P0AD19 | Positive | 2440736 - 2441431 | 24471.1 |
| cytidine deaminase | SK85_02391 | B7LA09 | Positive | 2441561 - 2442445 | 31541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





