Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02372 | P33355 | Negative | 2421442 - 2421912 | 17973.9 |
| transcriptional regulatory protein yeht | SK85_02373 | P0DUE7 | Negative | 2421959 - 2422678 | 27401.4 |
| sensor histidine kinase yehu | SK85_02374 | P0AD15 | Negative | 2422675 - 2424360 | 62096.3 |
| hth-type transcriptional regulator mlra | SK85_02375 | P33358 | Positive | 2424582 - 2425313 | 28047.8 |
| hypothetical protein | SK85_02376 | A7ZNU4 | Positive | 2425373 - 2425480 | 3642.85 |
| abc transporter membrane protein | SK85_02377 | P33359 | Negative | 2425461 - 2426192 | 25530.1 |
| abc transporter atp-binding protein | SK85_02378 | P33360 | Negative | 2426197 - 2427123 | 34422.7 |
| abc transporter membrane protein | SK85_02379 | P33361 | Negative | 2427116 - 2428273 | 41141.1 |
| abc transporter periplasmic-binding protein | SK85_02380 | P33362 | Negative | 2428280 - 2429197 | 32611.1 |
| periplasmic beta-glucosidase | SK85_02381 | P33363 | Negative | 2429408 - 2431675 | 82407.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





