Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine-trna ligase | SK85_02362 | A8A1X8 | Positive | 2404018 - 2406051 | 76271.9 |
| molybdate metabolism regulator molr | SK85_02363 | Not Available | Positive | 2406192 - 2409986 | 141056.0 |
| hypothetical protein | SK85_02364 | P33346 | Positive | 2409996 - 2413628 | 137948.0 |
| hypothetical protein | SK85_02365 | P33347 | Positive | 2413689 - 2414006 | 12604.0 |
| abc transporter atp-binding protein | SK85_02366 | P33348 | Positive | 2414313 - 2415401 | 39726.7 |
| hypothetical protein | SK85_02367 | P33349 | Positive | 2415412 - 2417691 | 83384.8 |
| hypothetical protein | SK85_02368 | P33352 | Positive | 2417684 - 2418820 | 42102.6 |
| hypothetical protein | SK85_02369 | P33353 | Positive | 2418817 - 2419062 | 8540.17 |
| hypothetical protein | SK85_02370 | Not Available | Positive | 2419062 - 2420816 | 64763.4 |
| lipoprotein yehr | SK85_02371 | P33354 | Positive | 2420941 - 2421402 | 16595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





