Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyethylthiazole kinase | SK85_02352 | C4ZSI8 | Negative | 2394231 - 2395019 | 27340.7 |
| transcriptional repressor rcnr | SK85_02353 | A7ZNS4 | Negative | 2395242 - 2395514 | 10134.5 |
| nickel/cobalt efflux system rcna | SK85_02354 | P76425 | Positive | 2395635 - 2396459 | 30421.2 |
| nickel/cobalt homeostasis protein rcnb | SK85_02355 | P64535 | Positive | 2396678 - 2397016 | 12466.8 |
| fimbrial-like adhesin protein | SK85_02356 | P33340 | Negative | 2397098 - 2398132 | 36886.9 |
| outer membrane protein | SK85_02357 | Not Available | Negative | 2398148 - 2400628 | 92230.1 |
| periplasmic pilin chaperone | SK85_02358 | P33342 | Negative | 2400644 - 2401318 | 24838.3 |
| fimbrial-like adhesin protein | SK85_02359 | P33343 | Negative | 2401398 - 2401940 | 19061.6 |
| hypothetical protein | SK85_02360 | P33344 | Negative | 2402233 - 2402514 | 10137.2 |
| protein mrp | SK85_02361 | P0AF09 | Negative | 2402777 - 2403886 | 39940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





