Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactitol-specific phosphotransferase enzyme iia component | SK85_02342 | P69814 | Negative | 2384315 - 2384767 | 16908.4 |
| d-tagatose-1,6-bisphosphate aldolase subunit gatz | SK85_02343 | A7ZNR4 | Negative | 2384777 - 2386039 | 47111.3 |
| d-tagatose-1,6-bisphosphate aldolase subunit gaty | SK85_02344 | C4ZSI0 | Negative | 2386068 - 2386922 | 30813.7 |
| fructose-bisphosphate aldolase class 1 | SK85_02345 | P0A992 | Negative | 2387230 - 2388282 | 38111.4 |
| nucleoside transporter | SK85_02346 | P76417 | Positive | 2388539 - 2389816 | 47361.8 |
| hydrolase | SK85_02347 | P76418 | Positive | 2389813 - 2390817 | 35622.5 |
| kinase | SK85_02348 | P76419 | Positive | 2390814 - 2391779 | 34387.4 |
| transcriptional regulator | SK85_02349 | P0ACM7 | Negative | 2391753 - 2392499 | 28278.8 |
| lysozyme | SK85_02350 | P76421 | Negative | 2392551 - 2393369 | 31605.7 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SK85_02351 | P76422 | Negative | 2393434 - 2394234 | 28635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





