Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine-protein kinase baes | SK85_02332 | P30847 | Positive | 2374486 - 2375889 | 51994.4 |
| transcriptional regulatory protein baer | SK85_02333 | P69229 | Positive | 2375886 - 2376608 | 27657.5 |
| hypothetical protein | SK85_02334 | Q83KI3 | Positive | 2376799 - 2377131 | 11994.9 |
| protease | SK85_02335 | P76403 | Positive | 2377278 - 2378639 | 51196.1 |
| hypothetical protein | SK85_02336 | P76406 | Negative | 2378970 - 2379287 | 11465.9 |
| lipid kinase yegs | SK85_02337 | A8A1V4 | Positive | 2379693 - 2380592 | 32006.6 |
| galactitol utilization operon repressor | SK85_02338 | P36930 | Negative | 2380674 - 2381453 | 27960.9 |
| galactitol-1-phosphate 5-dehydrogenase | SK85_02339 | P0A9S4 | Negative | 2381553 - 2382593 | 37392.3 |
| galactitol permease iic component | SK85_02340 | P69832 | Negative | 2382641 - 2383996 | 48396.2 |
| galactitol-specific phosphotransferase enzyme iib component | SK85_02341 | P37188 | Negative | 2384000 - 2384284 | 10222.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





