Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02322 | P76394 | Positive | 2361448 - 2361909 | 17385.8 |
| hypothetical protein | SK85_02323 | P76395 | Negative | 2361974 - 2362654 | 24425.2 |
| hypothetical protein | SK85_02324 | P76396 | Negative | 2362732 - 2363391 | 24204.0 |
| transposase for insertion sequence element is421 | SK85_02325 | Not Available | Positive | 2363985 - 2365097 | 40911.1 |
| hypothetical protein | SK85_02326 | Not Available | Positive | 2365120 - 2365260 | 5345.71 |
| hypothetical protein | SK85_02327 | Not Available | Positive | 2365310 - 2365456 | 5309.72 |
| multidrug resistance protein mdta | SK85_02328 | B7UTB2 | Positive | 2365626 - 2366873 | 44500.8 |
| multidrug resistance protein mdtb | SK85_02329 | C4ZSG3 | Positive | 2366873 - 2369995 | 112084.0 |
| multidrug resistance protein mdtc | SK85_02330 | Q3Z0C8 | Positive | 2369996 - 2373073 | 111086.0 |
| multidrug efflux system protein | SK85_02331 | C4ZSG5 | Positive | 2373074 - 2374489 | 50894.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





