Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02282 | P36667 | Negative | 2315299 - 2316105 | 31845.9 |
| udp-galactopyranose mutase | SK85_02283 | P37747 | Negative | 2316107 - 2317207 | 43039.3 |
| hypothetical protein | SK85_02284 | P37746 | Negative | 2317197 - 2318471 | 46939.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SK85_02285 | P37780 | Negative | 2318500 - 2319030 | 20122.0 |
| glucose-1-phosphate thymidylyltransferase | SK85_02286 | P37779 | Negative | 2319035 - 2319913 | 32623.5 |
| dtdp-4-dehydrorhamnose reductase | SK85_02287 | P37760 | Negative | 2319971 - 2320870 | 32661.9 |
| dtdp-glucose 4,6-dehydratase 1 | SK85_02288 | P37759 | Negative | 2320870 - 2321955 | 40531.4 |
| utp-glucose-1-phosphate uridylyltransferase | SK85_02289 | P0AAB7 | Negative | 2322327 - 2323220 | 32805.1 |
| colanic acid biosynthesis protein wcam | SK85_02290 | P37775 | Negative | 2323395 - 2324789 | 51321.8 |
| colanic acid biosynthesis glycosyltransferase wcal | SK85_02291 | P71243 | Negative | 2324800 - 2326020 | 45407.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





