Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SK85_02262 | P33015 | Negative | 2294026 - 2295030 | 36188.1 |
| putrescine importer plap | SK85_02263 | P0AA48 | Negative | 2295263 - 2296621 | 49540.5 |
| transcriptional regulator | SK85_02264 | P76369 | Negative | 2296888 - 2297838 | 34931.0 |
| protein yeez | SK85_02265 | P0AD13 | Negative | 2297863 - 2298687 | 29681.7 |
| atp phosphoribosyltransferase | SK85_02266 | A7ZNJ1 | Positive | 2299309 - 2300208 | 33382.8 |
| histidinol dehydrogenase | SK85_02267 | P06988 | Positive | 2300214 - 2301518 | 46122.0 |
| histidinol-phosphate aminotransferase | SK85_02268 | B7M400 | Positive | 2301515 - 2302585 | 39362.3 |
| histidine biosynthesis hisb | SK85_02269 | Q8FG50 | Positive | 2302585 - 2303652 | 40277.4 |
| imidazole glycerol phosphate synthase subunit hish | SK85_02270 | P60596 | Positive | 2303652 - 2304242 | 21668.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SK85_02271 | A7ZNJ6 | Positive | 2304242 - 2304979 | 26045.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





