Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage protein | SK85_02252 | Not Available | Positive | 2286370 - 2286591 | 8411.21 |
| cytoskeleton bundling-enhancing protein cbea | SK85_02253 | P76364 | Positive | 2286671 - 2287039 | 13570.1 |
| cytoskeleton-binding toxin cbta | SK85_02254 | P64525 | Positive | 2287128 - 2287391 | 9525.48 |
| phage protein | SK85_02255 | P64527 | Positive | 2287498 - 2287692 | 6959.16 |
| hypothetical protein | SK85_02256 | A7ZNH9 | Negative | 2288590 - 2288919 | 12778.5 |
| inner membrane protein yeea | SK85_02257 | P33011 | Negative | 2289091 - 2290149 | 39930.7 |
| inhibitor | SK85_02258 | P33012 | Negative | 2290348 - 2290821 | 18046.3 |
| d-alanyl-d-alanine carboxypeptidase dacd | SK85_02259 | P33013 | Negative | 2290940 - 2292106 | 43339.5 |
| exodeoxyribonuclease i | SK85_02260 | P04995 | Positive | 2292315 - 2293742 | 54421.5 |
| hypothetical protein | SK85_02261 | P33014 | Negative | 2293785 - 2294012 | 8092.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





