Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02242 | Not Available | Positive | 2276271 - 2277422 | 43834.6 |
| gtpase | SK85_02243 | Not Available | Positive | 2277506 - 2278378 | 32580.9 |
| hypothetical protein | SK85_02244 | P0DM86 | Positive | 2278596 - 2280992 | 90173.0 |
| hypothetical protein | SK85_02245 | Not Available | Positive | 2280989 - 2281894 | 33939.9 |
| nte family protein | SK85_02246 | Not Available | Positive | 2281891 - 2282961 | 38243.2 |
| hypothetical protein | SK85_02247 | Not Available | Positive | 2283097 - 2283780 | 25170.2 |
| hypothetical protein | SK85_02248 | Not Available | Positive | 2283796 - 2284206 | 15097.3 |
| phage protein | SK85_02249 | Not Available | Positive | 2284427 - 2285248 | 31267.5 |
| phage antirestriction protein | SK85_02250 | P75676 | Positive | 2285330 - 2285809 | 18214.4 |
| phage dna repair protein | SK85_02251 | Not Available | Positive | 2285825 - 2286301 | 17676.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





