Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | SK85_02232 | Not Available | Positive | 2267042 - 2268256 | 43695.9 |
| hypothetical protein | SK85_02233 | Not Available | Positive | 2268270 - 2268848 | 21587.7 |
| transposase insc for insertion element is2 on f plasmid | SK85_02234 | Not Available | Positive | 2268890 - 2269255 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_02235 | Not Available | Positive | 2269213 - 2270118 | 34400.0 |
| hypothetical protein | SK85_02236 | Not Available | Positive | 2270335 - 2270535 | 7414.29 |
| transposase | SK85_02237 | Not Available | Negative | 2271407 - 2272294 | 33679.1 |
| transposase | SK85_02238 | Not Available | Negative | 2272294 - 2272620 | 12644.0 |
| hypothetical protein | SK85_02239 | Not Available | Positive | 2272975 - 2273181 | 7713.43 |
| hypothetical protein | SK85_02240 | Not Available | Positive | 2273275 - 2273877 | 23347.0 |
| hypothetical protein | SK85_02241 | Not Available | Negative | 2275458 - 2275550 | 3340.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





