Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative structural component | SK85_01444 | Not Available | Positive | 1461440 - 1461886 | 16671.0 |
| Putative minor tail protein | SK85_01445 | Not Available | Positive | 1461883 - 1462227 | 12414.8 |
| Putative tail protein | SK85_01446 | Not Available | Positive | 1462292 - 1463008 | 25411.9 |
| Putative tail assembly protein | SK85_01447 | Not Available | Positive | 1463023 - 1463397 | 14006.7 |
| Phage tail protein | SK85_01448 | Not Available | Positive | 1463493 - 1463702 | 7604.94 |
| Tail tape measure protein | SK85_01449 | Not Available | Positive | 1463750 - 1466992 | 115655.0 |
| Putative minor tail protein | SK85_01450 | Not Available | Positive | 1466985 - 1467326 | 13327.9 |
| Putative tail fiber component | SK85_01451 | Not Available | Positive | 1467326 - 1468024 | 25709.3 |
| Putative tail fiber component | SK85_01452 | Not Available | Positive | 1468035 - 1468778 | 28264.4 |
| Putative tail component | SK85_01453 | Not Available | Positive | 1468775 - 1469356 | 20211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





