Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cbl | SK85_02222 | Q47083 | Negative | 2257515 - 2258465 | 35903.1 |
| nitrogen assimilation regulatory protein nac | SK85_02223 | Q47005 | Negative | 2258567 - 2259484 | 32861.0 |
| Trna-asn | Not Available | Not Available | Positive | 2259811 - 2259886 | Not Available |
| l,d-transpeptidase linking lpp to murein | SK85_02225 | P39176 | Negative | 2259942 - 2260877 | 34528.4 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SK85_02226 | B7L916 | Negative | 2260939 - 2262018 | 36917.2 |
| cobalamin synthase | SK85_02227 | A7ZNF6 | Negative | 2262030 - 2262773 | 26379.3 |
| bifunctional adenosylcobalamin biosynthesis protein cobu | SK85_02228 | P0AE77 | Negative | 2262770 - 2263312 | 20034.0 |
| transposase | SK85_02229 | Not Available | Positive | 2264975 - 2265301 | 12644.0 |
| transposase | SK85_02230 | Not Available | Positive | 2265301 - 2266188 | 33695.2 |
| hypothetical protein | SK85_02231 | Not Available | Positive | 2266730 - 2266846 | 4238.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





