Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, signal transducer | SK85_02202 | Not Available | Negative | 2218707 - 2219987 | 44927.6 |
| yersiniabactin-iron abc transporter permease atp-binding protein | SK85_02203 | P71082 | Negative | 2219980 - 2221782 | 66466.4 |
| yersiniabactin abc transporter atp-binding protein/permease | SK85_02204 | G7CBF5 | Negative | 2221769 - 2223571 | 66345.0 |
| arac family transcriptional regulator | SK85_02205 | Not Available | Positive | 2223738 - 2224697 | 35853.1 |
| high-molecular-weight protein 2 | SK85_02206 | P48633 | Positive | 2224888 - 2230995 | 228759.0 |
| hmwp1 nonribosomal peptide/polyketide synthase | SK85_02207 | Q7TXL6 | Positive | 2231083 - 2240574 | 348771.0 |
| thiazolinyl-s-hmwp1 reductase | SK85_02208 | Not Available | Positive | 2240571 - 2241671 | 40956.2 |
| yersiniabactin synthetase, thioesterase component | SK85_02209 | Q9ZGI1 | Positive | 2241668 - 2242471 | 29827.4 |
| (2,3-dihydroxybenzoyl)adenylate synthase | SK85_02210 | P40871 | Positive | 2242475 - 2244052 | 57288.6 |
| pesticin receptor | SK85_02211 | P46359 | Positive | 2244183 - 2246204 | 73729.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





