Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | SK85_02192 | P76340 | Negative | 2210057 - 2210839 | 29532.6 |
| 5-hydroxyisourate hydrolase | SK85_02193 | Q8XB75 | Positive | 2210861 - 2211274 | 15537.6 |
| sulfoxide reductase catalytic subunit yedy | SK85_02194 | B7NRB1 | Positive | 2211383 - 2212387 | 37418.9 |
| sulfoxide reductase heme-binding subunit yedz | SK85_02195 | Q83KM2 | Positive | 2212388 - 2213023 | 24010.6 |
| metal-binding protein zint | SK85_02196 | P76344 | Positive | 2213281 - 2213931 | 24786.2 |
| Trna-ser | Not Available | Not Available | Positive | 2214601 - 2214690 | Not Available |
| protein mtfa | SK85_02198 | Q0TGJ4 | Positive | 2214784 - 2215581 | 30156.6 |
| Trna-asn | Not Available | Not Available | Positive | 2215682 - 2215757 | Not Available |
| integrase | SK85_02200 | P39347 | Positive | 2216138 - 2217181 | 39665.3 |
| salicylate synthase | SK85_02201 | Q73XV3 | Negative | 2217375 - 2218679 | 47994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





