Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yedi | SK85_02182 | P46125 | Negative | 2200352 - 2201269 | 32144.7 |
| blue pigment (indigoidine) exporter | SK85_02183 | P0AA72 | Positive | 2201442 - 2202362 | 32244.1 |
| short patch repair protein | SK85_02184 | P09184 | Negative | 2202351 - 2202821 | 18002.6 |
| dna-cytosine methyltransferase | SK85_02185 | P0AEE0 | Negative | 2202802 - 2204220 | 53483.8 |
| phosphohydrolase | SK85_02186 | P46144 | Negative | 2204287 - 2204982 | 25916.7 |
| inner membrane protein yedr | SK85_02187 | P76334 | Negative | 2205022 - 2205405 | 14388.5 |
| outer membrane protein s1 | SK85_02188 | Q56110 | Positive | 2205954 - 2207147 | 43044.9 |
| hypothetical protein | SK85_02189 | Not Available | Negative | 2207287 - 2207481 | 7638.55 |
| hsp31-like protein | SK85_02190 | Q3Z0M5 | Positive | 2207740 - 2208591 | 31280.2 |
| two-component system sensory kinase | SK85_02191 | P76339 | Negative | 2208699 - 2210057 | 50940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





