Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flio | SK85_02172 | P22586 | Positive | 2193339 - 2193704 | 12744.7 |
| flagellar biosynthetic protein flip | SK85_02173 | P0AC06 | Positive | 2193704 - 2194441 | 26930.1 |
| flagellar biosynthetic protein fliq | SK85_02174 | P0AC09 | Positive | 2194451 - 2194720 | 9632.54 |
| flagellar biosynthetic protein flir | SK85_02175 | P33135 | Positive | 2194729 - 2195514 | 28521.3 |
| transcriptional regulatory protein rcsa | SK85_02176 | P0DMD0 | Positive | 2195804 - 2196427 | 23522.8 |
| protein dsrb | SK85_02177 | A7ZN75 | Negative | 2196471 - 2196659 | 6946.22 |
| hypothetical protein | SK85_02178 | P64520 | Positive | 2196822 - 2197049 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase | SK85_02179 | B6I101 | Positive | 2197347 - 2198162 | 30527.1 |
| cellulose synthesis regulatory protein | SK85_02180 | Q3Z0N3 | Negative | 2198159 - 2199853 | 64231.5 |
| hypothetical protein | SK85_02181 | P64518 | Negative | 2200091 - 2200273 | 6678.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





