Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar assembly protein flih | SK85_02162 | P31068 | Positive | 2186389 - 2187075 | 25128.7 |
| flagellum-specific atp synthase | SK85_02163 | P52612 | Positive | 2187075 - 2188448 | 49318.6 |
| flagellar flij protein | SK85_02164 | P52613 | Positive | 2188467 - 2188910 | 17325.6 |
| flagellar hook-length control protein | SK85_02165 | P52614 | Positive | 2188907 - 2190034 | 39284.9 |
| flagellar protein flil | SK85_02166 | P0ABY0 | Positive | 2190139 - 2190603 | 17221.8 |
| flagellar motor switch protein flim | SK85_02167 | P06974 | Positive | 2190608 - 2191612 | 37837.4 |
| flagellar motor switch protein flin | SK85_02168 | Not Available | Positive | 2191609 - 2191833 | 7923.19 |
| transposase | SK85_02169 | Not Available | Negative | 2191873 - 2192760 | 33679.1 |
| transposase | SK85_02170 | Not Available | Negative | 2192760 - 2193086 | 12644.0 |
| flagellar motor switch protein flin | SK85_02171 | P15070 | Positive | 2193181 - 2193336 | 5599.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





