Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-specific transporter | SK85_02132 | P0AAD4 | Positive | 2160828 - 2162039 | 42795.7 |
| hypothetical protein | SK85_02133 | P0AD05 | Negative | 2162101 - 2162766 | 24982.5 |
| Trna-leu | Not Available | Not Available | Positive | 2162962 - 2163048 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2163061 - 2163134 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2163189 - 2163264 | Not Available |
| cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase | SK85_02137 | P0ABG0 | Negative | 2163416 - 2163964 | 20701.7 |
| uvrabc system protein c | SK85_02138 | A7ZN37 | Negative | 2164021 - 2165853 | 68206.0 |
| response regulator uvry | SK85_02139 | P0AED5 | Negative | 2165850 - 2166506 | 23894.1 |
| hypothetical protein | SK85_02140 | P0AD08 | Positive | 2166965 - 2167189 | 8239.04 |
| regulatory protein sdia | SK85_02141 | P07026 | Negative | 2167256 - 2167978 | 28079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





