Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein methyltransferase | SK85_02112 | P07364 | Negative | 2140428 - 2141288 | 32864.3 |
| methyl-accepting chemotaxis protein iv | SK85_02113 | P07018 | Negative | 2141307 - 2142908 | 57429.2 |
| methyl-accepting chemotaxis protein ii | SK85_02114 | P07017 | Negative | 2142954 - 2144615 | 60000.3 |
| chemotaxis protein chew | SK85_02115 | P0A966 | Negative | 2144760 - 2145263 | 18084.9 |
| chemotaxis protein chea | SK85_02116 | P07363 | Negative | 2145284 - 2147248 | 71529.9 |
| motility protein b | SK85_02117 | P0AF07 | Negative | 2147253 - 2148179 | 34188.1 |
| motility protein a | SK85_02118 | P09348 | Negative | 2148176 - 2149063 | 31941.3 |
| flagellar transcriptional regulator flhc | SK85_02119 | P0ABY9 | Negative | 2149190 - 2149768 | 21568.3 |
| flagellar transcriptional regulator flhd | SK85_02120 | A7ZN19 | Negative | 2149771 - 2150121 | 13317.2 |
| universal stress protein c | SK85_02121 | P46888 | Positive | 2150900 - 2151328 | 15608.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





