Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein cutc | SK85_02102 | Q8XCH4 | Negative | 2130443 - 2131189 | 26632.2 |
| protein yecm | SK85_02103 | P52007 | Negative | 2131203 - 2131769 | 21194.1 |
| arginine-trna ligase | SK85_02104 | Q8FGQ0 | Positive | 2131985 - 2133718 | 64685.7 |
| hypothetical protein | SK85_02105 | P76296 | Positive | 2133895 - 2134383 | 18872.1 |
| flagellar protein flhe | SK85_02106 | P76297 | Negative | 2134504 - 2134899 | 14165.5 |
| flagellar biosynthesis protein flha | SK85_02107 | P76298 | Negative | 2134896 - 2136974 | 74827.7 |
| flagellar biosynthetic protein flhb | SK85_02108 | P76299 | Negative | 2136967 - 2138115 | 42213.4 |
| protein phosphatase chez | SK85_02109 | C6EBU6 | Negative | 2138317 - 2138961 | 23977.4 |
| chemotaxis protein chey | SK85_02110 | P0AE68 | Negative | 2138972 - 2139361 | 14098.2 |
| chemotaxis response regulator protein-glutamate methylesterase | SK85_02111 | Q8FGP5 | Negative | 2139376 - 2140425 | 37443.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





