Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yebe | SK85_02072 | P33218 | Negative | 2100974 - 2101633 | 23776.2 |
| hypothetical protein | SK85_02073 | Not Available | Positive | 2101693 - 2101803 | 4099.04 |
| hypothetical protein | SK85_02074 | Not Available | Positive | 2101840 - 2102046 | 7287.61 |
| protein yebf | SK85_02075 | Q8XCK0 | Negative | 2101960 - 2102316 | 12904.3 |
| dna damage-inducible protein y | SK85_02076 | P0ACZ1 | Negative | 2102383 - 2102673 | 10717.5 |
| phosphoribosylglycinamide formyltransferase 2 | SK85_02077 | C4ZZK6 | Positive | 2102807 - 2103985 | 42436.2 |
| khg/kdpg aldolase | SK85_02078 | P0A957 | Negative | 2104041 - 2104682 | 22285.3 |
| phosphogluconate dehydratase | SK85_02079 | P0ADF7 | Negative | 2104719 - 2106530 | 64642.9 |
| glucose-6-phosphate 1-dehydrogenase | SK85_02080 | P0AC54 | Negative | 2106765 - 2108240 | 55707.5 |
| hth-type transcriptional regulator hexr | SK85_02081 | P46118 | Positive | 2108578 - 2109447 | 31959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





