Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SK85_02042 | P0AEC2 | Negative | 2071955 - 2073511 | 56531.5 |
| hypothetical protein | SK85_02043 | P0DPP2 | Negative | 2073499 - 2073708 | 8073.75 |
| pts system mannose-specific eiiab component | SK85_02044 | P69799 | Positive | 2073974 - 2074945 | 35049.6 |
| mannose permease iic component | SK85_02045 | P69803 | Positive | 2075008 - 2075808 | 27637.6 |
| mannose permease iid component | SK85_02046 | P69805 | Positive | 2075821 - 2076672 | 30957.4 |
| inner membrane protein | SK85_02047 | A7ZMU2 | Positive | 2076727 - 2077185 | 17616.4 |
| inner membrane protein | SK85_02048 | A7ZMU3 | Positive | 2077614 - 2078180 | 20118.3 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | SK85_02049 | P36999 | Negative | 2078177 - 2078986 | 30420.5 |
| cold shock-like protein cspc | SK85_02050 | P0A9Y8 | Negative | 2079152 - 2079361 | 7402.76 |
| hypothetical protein | SK85_02051 | P64500 | Negative | 2080187 - 2080474 | 10793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





