Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SK85_02032 | P0AA92 | Negative | 2061883 - 2062464 | 20922.4 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SK85_02033 | P76256 | Negative | 2062504 - 2063199 | 25182.3 |
| nucleoside triphosphate hydrolase | SK85_02034 | P76257 | Negative | 2063257 - 2065167 | 70365.9 |
| rutc family protein yoab | SK85_02035 | P0AEB8 | Positive | 2065296 - 2065643 | 12625.1 |
| hypothetical protein | SK85_02036 | P64491 | Positive | 2066059 - 2066358 | 10836.0 |
| hypothetical protein | SK85_02037 | A7ZMT4 | Negative | 2066478 - 2066657 | 6554.7 |
| aminodeoxychorismate synthase component 1 | SK85_02038 | P05041 | Positive | 2066731 - 2068092 | 50956.3 |
| nudix hydrolase | SK85_02039 | C4ZZG9 | Positive | 2068096 - 2068674 | 21462.9 |
| l-serine dehydratase 1 | SK85_02040 | P16095 | Positive | 2068858 - 2070222 | 48909.5 |
| phosphodiesterase | SK85_02041 | P76261 | Positive | 2070353 - 2071951 | 59715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





