Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative serine/threonine phosphatase | SK85_01423 | Not Available | Positive | 1445313 - 1446056 | 27296.7 |
| Putative dna methylase | SK85_01424 | Not Available | Positive | 1446224 - 1446493 | 9804.81 |
| Hypothetical protein | SK85_01427 | Not Available | Positive | 1447768 - 1449621 | 66201.4 |
| Holin lysis protein s | SK85_01428 | P0A9R3 | Positive | 1449772 - 1449987 | 8054.78 |
| Hypothetical protein | SK85_01429 | Not Available | Positive | 1449992 - 1450798 | 29844.0 |
| Lysozyme protein r | SK85_01430 | P68920 | Positive | 1450841 - 1451374 | 19462.4 |
| Hypothetical protein | SK85_01431 | Not Available | Positive | 1451667 - 1451798 | 4525.92 |
| Rz lysis protein | SK85_01432 | Not Available | Positive | 1452017 - 1452511 | 18480.2 |
| hypothetical protein | SK85_01433 | Not Available | Positive | 1452508 - 1452732 | 8258.19 |
| Hypothetical protein | SK85_01434 | Q2EES0 | Negative | 1452931 - 1453131 | 7620.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





