Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02022 | Not Available | Positive | 2051610 - 2051750 | 5375.74 |
| hypothetical protein | SK85_02023 | P64489 | Negative | 2051698 - 2051880 | 6822.07 |
| leucine efflux protein | SK85_02024 | A8A0Z3 | Negative | 2052053 - 2052691 | 23202.0 |
| hth-type transcriptional regulator dmlr | SK85_02025 | P76250 | Negative | 2052818 - 2053741 | 34606.8 |
| d-malate dehydrogenase | SK85_02026 | P76251 | Positive | 2053844 - 2054929 | 40317.2 |
| hypothetical protein | SK85_02027 | P0ABD2 | Positive | 2055135 - 2056565 | 52356.5 |
| 2fe-2s cluster-containing protein | SK85_02028 | P0ABR8 | Positive | 2056597 - 2057721 | 42560.1 |
| oxidoreductase | SK85_02029 | P76254 | Positive | 2057777 - 2058742 | 35663.2 |
| ribonuclease d | SK85_02030 | P09155 | Negative | 2058796 - 2059911 | 42200.0 |
| long-chain-fatty-acid-coa ligase | SK85_02031 | P69452 | Negative | 2059993 - 2061744 | 64716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





