Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n,n'-diacetylchitobiose-specific phosphotransferase enzyme iib component | SK85_01962 | P69830 | Negative | 1991882 - 1992202 | 11427.2 |
| osmotically-inducible lipoprotein e | SK85_01963 | P0ADB2 | Negative | 1992501 - 1992839 | 12021.3 |
| nh(3)-dependent nad(+) synthetase | SK85_01964 | C4ZZ96 | Positive | 1993041 - 1993868 | 30638.6 |
| excinuclease cho | SK85_01965 | P76213 | Positive | 1994098 - 1994985 | 33740.8 |
| protein ves | SK85_01966 | C4ZZ98 | Negative | 1994945 - 1995520 | 21578.1 |
| spheroplast protein y | SK85_01967 | P77754 | Negative | 1995723 - 1996208 | 18200.1 |
| succinylglutamate desuccinylase | SK85_01968 | B7M1F6 | Negative | 1996538 - 1997506 | 35802.3 |
| n-succinylarginine dihydrolase | SK85_01969 | C4ZZA1 | Negative | 1997499 - 1998842 | 49301.4 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | SK85_01970 | C4ZZA2 | Negative | 1998839 - 2000317 | 52915.2 |
| arginine n-succinyltransferase | SK85_01971 | P0AE38 | Negative | 2000314 - 2001348 | 38458.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





