Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01413 | Q6FAK7 | Positive | 1438678 - 1439343 | 25866.8 |
| Host cell-killing modulation protein | SK85_01414 | P0ACG7 | Positive | 1439524 - 1439736 | 7808.85 |
| hypothetical protein | SK85_01415 | Not Available | Positive | 1439902 - 1440552 | 24819.2 |
| Xre family transcriptional regulator | SK85_01416 | Not Available | Positive | 1440533 - 1441636 | 41604.5 |
| hypothetical protein | SK85_01417 | Not Available | Positive | 1441746 - 1441967 | 8380.1 |
| Hypothetical protein | SK85_01418 | Not Available | Positive | 1442027 - 1442299 | 11420.3 |
| Hypothetical protein | SK85_01419 | Not Available | Positive | 1442301 - 1443347 | 39232.1 |
| Crossover junction endodeoxyribonuclease rusa | SK85_01420 | Q9MCN8 | Positive | 1443360 - 1443719 | 13579.7 |
| Bacteriophage antiterminator protein q | SK85_01421 | P13870 | Positive | 1443716 - 1444405 | 26840.2 |
| Putative protein kinase | SK85_01422 | Q7U095 | Positive | 1444552 - 1445316 | 29421.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





