Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein, fad-binding | SK85_01922 | P77378 | Positive | 1950984 - 1951922 | 33771.7 |
| oxidoreductase with fad/nad(p)-binding domain-containing protein | SK85_01923 | P77337 | Positive | 1951978 - 1953267 | 46013.8 |
| ferredoxin-like protein ydit | SK85_01924 | P77714 | Positive | 1953264 - 1953557 | 10724.7 |
| short-chain-fatty-acid-coa ligase | SK85_01925 | P38135 | Positive | 1953614 - 1955260 | 60677.4 |
| phosphoenolpyruvate synthase | SK85_01926 | P23538 | Negative | 1955317 - 1957695 | 87440.1 |
| phosphoenolpyruvate synthase regulatory protein | SK85_01927 | A7ZMH0 | Positive | 1958028 - 1958861 | 31212.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive | SK85_01928 | P00887 | Positive | 1959018 - 1960064 | 38733.3 |
| hypothetical protein | SK85_01929 | P0ACY0 | Positive | 1960196 - 1960387 | 7117.58 |
| hypothetical protein | SK85_01930 | C4ZYG8 | Negative | 1960391 - 1961827 | 54385.0 |
| hypothetical protein | SK85_01931 | P76204 | Negative | 1961890 - 1962603 | 27047.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





