Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s ferridoxin-type protein | SK85_01892 | P77375 | Negative | 1920929 - 1921597 | 25093.9 |
| hypothetical protein | SK85_01893 | P77564 | Negative | 1921661 - 1921861 | 7657.96 |
| hypothetical protein | SK85_01894 | Not Available | Negative | 1921861 - 1922298 | 16136.3 |
| oxidoreductase | SK85_01895 | P76192 | Negative | 1922311 - 1924413 | 77893.9 |
| 4fe-4s ferredoxin | SK85_01896 | P0AAL7 | Negative | 1924434 - 1925060 | 22368.2 |
| hypothetical protein | SK85_01897 | P0ACX7 | Negative | 1925515 - 1925724 | 7907.85 |
| pyruvate kinase i | SK85_01898 | P0AD62 | Positive | 1926281 - 1927693 | 50732.5 |
| major outer membrane lipoprotein lpp | SK85_01899 | P69778 | Positive | 1928004 - 1928240 | 8323.95 |
| murein l,d-transpeptidase | SK85_01900 | P76193 | Negative | 1928304 - 1929308 | 36084.5 |
| cysteine desulfuration protein sufe | SK85_01901 | B7L5N1 | Negative | 1929457 - 1929873 | 15801.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





