Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | SK85_01872 | P30014 | Positive | 1898858 - 1899505 | 23523.9 |
| atp-dependent helicase | SK85_01873 | P30015 | Positive | 1899598 - 1904214 | 169329.0 |
| glutaredoxin-4 | SK85_01874 | P0AC71 | Negative | 1904265 - 1904612 | 12879.5 |
| murein dd-endopeptidase meph | SK85_01875 | P76190 | Positive | 1904946 - 1905761 | 29918.2 |
| superoxide dismutase | SK85_01876 | P0AGD5 | Positive | 1905889 - 1906470 | 21266.8 |
| inner membrane transporter ydhp | SK85_01877 | P77389 | Negative | 1906705 - 1907874 | 40066.7 |
| hypothetical protein | SK85_01878 | Not Available | Negative | 1908040 - 1908129 | 2997.87 |
| hth-type transcriptional repressor purr | SK85_01879 | B7L5L1 | Positive | 1908428 - 1909453 | 38177.0 |
| transcriptional regulator | SK85_01880 | P0ACR3 | Negative | 1909450 - 1910382 | 35251.9 |
| inner membrane transporter ydhc | SK85_01881 | P37597 | Positive | 1910495 - 1911706 | 43399.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





