Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | SK85_01862 | A7ZMA4 | Negative | 1890901 - 1891335 | 16354.0 |
| inner membrane protein | SK85_01863 | P64472 | Positive | 1891536 - 1891772 | 8891.33 |
| undecaprenyl pyrophosphate phosphatase | SK85_01864 | P76185 | Positive | 1891775 - 1892632 | 31497.5 |
| inner membrane protein | SK85_01865 | P76186 | Positive | 1892632 - 1894644 | 75238.9 |
| superoxide dismutase | SK85_01866 | P0AGD2 | Negative | 1894645 - 1895166 | 17682.0 |
| oxidoreductase ydhf | SK85_01867 | P76187 | Negative | 1895247 - 1896143 | 33677.6 |
| hypothetical protein | SK85_01868 | P64474 | Negative | 1896192 - 1896431 | 9359.15 |
| hth-type transcriptional repressor nemr | SK85_01869 | P67431 | Positive | 1896534 - 1897133 | 22276.7 |
| n-ethylmaleimide reductase | SK85_01870 | P77258 | Positive | 1897170 - 1898267 | 39544.7 |
| lactoylglutathione lyase | SK85_01871 | P0AC82 | Positive | 1898348 - 1898755 | 14920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





