Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | SK85_01852 | P0AB84 | Positive | 1882034 - 1882669 | 23563.7 |
| hypothetical protein | SK85_01853 | Not Available | Positive | 1882797 - 1882997 | 7754.59 |
| dipeptide and tripeptide permease a | SK85_01854 | P77304 | Positive | 1883280 - 1884782 | 53994.4 |
| glutathione s-transferase gsta | SK85_01855 | P0A9D3 | Positive | 1884888 - 1885493 | 22885.7 |
| pyridoxamine kinase | SK85_01856 | P77150 | Negative | 1885537 - 1886397 | 31192.8 |
| tyrosine-trna ligase | SK85_01857 | A7ZM99 | Negative | 1886459 - 1887733 | 47529.6 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | SK85_01858 | B7URX9 | Negative | 1887862 - 1888518 | 25546.6 |
| lipoprotein | SK85_01859 | P28224 | Negative | 1888577 - 1888900 | 12321.9 |
| anhydro-n-acetylmuramic acid kinase | SK85_01860 | A8A0I3 | Negative | 1889004 - 1890113 | 39526.7 |
| outer membrane lipoprotein slyb | SK85_01861 | P0A906 | Positive | 1890387 - 1890854 | 15602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





