Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative repressor protein | SK85_01403 | Not Available | Negative | 1433130 - 1433591 | 17431.0 |
| Putative transcriptional regulator | SK85_01404 | Not Available | Positive | 1433699 - 1433974 | 10271.2 |
| hypothetical protein | SK85_01405 | Not Available | Positive | 1433958 - 1434383 | 15979.3 |
| Hypothetical protein | SK85_01406 | Not Available | Positive | 1434455 - 1435495 | 38620.1 |
| Replication protein 14 | SK85_01407 | P14814 | Positive | 1435527 - 1435949 | 16340.5 |
| Hypothetical protein | SK85_01408 | P76066 | Positive | 1435983 - 1436309 | 11950.3 |
| Putative transposase orfb | SK85_01409 | Not Available | Negative | 1436349 - 1437236 | 33679.1 |
| Putative transposase orfa protein of is629 | SK85_01410 | Not Available | Negative | 1437236 - 1437562 | 12644.0 |
| Hypothetical protein | SK85_01411 | Not Available | Positive | 1437706 - 1438062 | 13059.5 |
| Lygf | SK85_01412 | Not Available | Positive | 1438078 - 1438503 | 16518.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





