Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_01730 | Not Available | Positive | 1767579 - 1768484 | 34400.0 |
| hypothetical protein | SK85_01731 | P31130 | Negative | 1768549 - 1768941 | 14121.9 |
| protein ydej | SK85_01732 | P31131 | Positive | 1769217 - 1769735 | 18321.8 |
| peptidyl-dipeptidase dcp | SK85_01733 | P24171 | Negative | 1769779 - 1771824 | 77520.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SK85_01734 | P39831 | Positive | 1771961 - 1772707 | 27250.5 |
| transcriptional regulator | SK85_01735 | P0ACM2 | Positive | 1772796 - 1773482 | 26566.7 |
| hypothetical protein | SK85_01736 | P64465 | Positive | 1773659 - 1773862 | 7276.83 |
| mannonate dehydrogenase | SK85_01737 | P77260 | Negative | 1773897 - 1775357 | 53688.3 |
| hypothetical protein | SK85_01800 | B7LZX5 | Positive | 1826415 - 1826756 | 12909.3 |
| spermidine n(1)-acetyltransferase | SK85_01801 | P0A952 | Positive | 1826791 - 1827351 | 21888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





