Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2-degrading protein lsrg | SK85_01710 | P64462 | Positive | 1750362 - 1750652 | 11255.4 |
| trans-aconitate 2-methyltransferase | SK85_01711 | C4ZWT6 | Positive | 1750709 - 1751467 | 28935.5 |
| inner membrane protein | SK85_01712 | P76146 | Negative | 1751471 - 1752385 | 34811.0 |
| altronate oxidoreductase | SK85_01713 | P0A6L8 | Negative | 1752592 - 1754043 | 54811.3 |
| diguanylate cyclase | SK85_01714 | P76147 | Negative | 1754270 - 1755217 | 34298.3 |
| hypothetical protein | SK85_01715 | P76148 | Negative | 1755329 - 1755688 | 13544.5 |
| glutaminase 2 | SK85_01716 | P0A6W2 | Negative | 1755688 - 1756614 | 33517.6 |
| succinate semialdehyde dehydrogenase | SK85_01717 | P76149 | Negative | 1756678 - 1758066 | 49750.7 |
| transcriptional regulator | SK85_01718 | P77309 | Positive | 1758167 - 1759048 | 32484.9 |
| hypothetical protein | SK85_01719 | P76150 | Positive | 1759126 - 1759986 | 33080.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





