Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial-like adhesin protein | SK85_01700 | P77588 | Negative | 1741510 - 1742403 | 31538.6 |
| transposase insc for insertion element | SK85_01701 | Not Available | Positive | 1742457 - 1742822 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_01702 | Not Available | Positive | 1742780 - 1743535 | 28717.3 |
| serine/threonine-protein kinase hipa | SK85_01703 | P23874 | Negative | 1744034 - 1745344 | 48843.1 |
| antitoxin hipb | SK85_01704 | P23873 | Negative | 1745344 - 1745610 | 10016.9 |
| autoinducer 2 import atp-binding protein lsra | SK85_01705 | B1XEA1 | Positive | 1746125 - 1746388 | 9749.6 |
| autoinducer 2 import system permease lsrc | SK85_01706 | B1XEA2 | Positive | 1746382 - 1747410 | 36397.1 |
| autoinducer 2 import system permease lsrd | SK85_01707 | B1XEA3 | Positive | 1747410 - 1748402 | 34516.6 |
| autoinducer 2-binding protein lsrb | SK85_01708 | B1XEA4 | Positive | 1748414 - 1749436 | 36686.9 |
| autoinducer-2 (ai-2) aldolase | SK85_01709 | B1XEA5 | Positive | 1749463 - 1750338 | 31876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





