Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate:gamma-aminobutyrate antiporter | SK85_01690 | P63235 | Negative | 1723644 - 1725179 | 55080.0 |
| glutamate decarboxylase beta | SK85_01691 | P69911 | Negative | 1725335 - 1726735 | 52671.0 |
| peptidase | SK85_01692 | P31828 | Negative | 1727097 - 1729880 | 104219.0 |
| porin | SK85_01693 | P31827 | Negative | 1730222 - 1732309 | 78356.8 |
| inner membrane abc transporter atp-binding protein ydda | SK85_01694 | P31826 | Negative | 1732347 - 1734032 | 64988.5 |
| anaerobic sulfatase maturase | SK85_01695 | P76134 | Negative | 1734323 - 1735480 | 44520.3 |
| sulfatase yden | SK85_01696 | P77318 | Negative | 1735532 - 1737214 | 62805.5 |
| hth-type transcriptional regulator ydeo | SK85_01697 | P76135 | Negative | 1737616 - 1738377 | 28742.9 |
| two-component-system connector protein safa | SK85_01698 | B1IRV8 | Negative | 1738452 - 1738649 | 7272.08 |
| protein ydep | SK85_01699 | P77561 | Negative | 1738897 - 1741176 | 83499.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





