Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ala-d-ala transporter subunit | SK85_01680 | P77622 | Negative | 1711802 - 1712728 | 34623.1 |
| d-ala-d-ala transporter subunit | SK85_01681 | P77268 | Negative | 1712721 - 1713707 | 36101.1 |
| d-ala-d-ala transporter subunit | SK85_01682 | P77463 | Negative | 1713704 - 1714600 | 31972.9 |
| d-ala-d-ala transporter subunit | SK85_01683 | P77308 | Negative | 1714597 - 1715619 | 37347.3 |
| d-ala-d-ala transporter subunit | SK85_01684 | P76128 | Negative | 1715621 - 1717171 | 57660.3 |
| d-alanyl-d-alanine dipeptidase | SK85_01685 | P77790 | Negative | 1717185 - 1717766 | 21244.2 |
| oxygen sensor protein dosp | SK85_01686 | P76129 | Negative | 1718024 - 1720423 | 90265.6 |
| diguanylate cyclase dosc | SK85_01687 | P0AA90 | Negative | 1720448 - 1721074 | 24079.0 |
| diguanylate cyclase dosc | SK85_01688 | Not Available | Negative | 1721102 - 1721830 | 27987.5 |
| lipoprotein | SK85_01689 | P64427 | Negative | 1722194 - 1723513 | 49576.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





