Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01660 | P37757 | Negative | 1689833 - 1690726 | 32352.8 |
| respiratory nitrate reductase 2 gamma chain | SK85_01661 | P0AF33 | Negative | 1690805 - 1691485 | 26019.5 |
| nitrate reductase molybdenum cofactor assembly chaperone | SK85_01662 | P19317 | Negative | 1691482 - 1692177 | 26162.0 |
| respiratory nitrate reductase 2 beta chain | SK85_01663 | P19318 | Negative | 1692177 - 1693721 | 58545.0 |
| respiratory nitrate reductase 2 alpha chain | SK85_01664 | P19319 | Negative | 1693718 - 1697458 | 140234.0 |
| nitrate/nitrite transporter naru | SK85_01665 | P37758 | Negative | 1697540 - 1698928 | 49893.1 |
| hypothetical protein | SK85_01666 | P76122 | Negative | 1699252 - 1699587 | 12897.2 |
| hypothetical protein | SK85_01667 | P76123 | Negative | 1699626 - 1700546 | 34767.1 |
| outer membrane porin protein ompd | SK85_01668 | P77519 | Negative | 1700606 - 1700896 | 10736.6 |
| aromatic amino acid exporter yddg | SK85_01669 | P46136 | Negative | 1701156 - 1701980 | 29443.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





