Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SK85_01640 | P64454 | Positive | 1667824 - 1667997 | 6646.44 |
| hypothetical protein | SK85_01641 | P64457 | Positive | 1668083 - 1668316 | 8800.41 |
| inner membrane protein ydcz | SK85_01642 | P76111 | Negative | 1668317 - 1668766 | 15856.1 |
| n-acyltransferase ynca | SK85_01643 | P76112 | Negative | 1668763 - 1669281 | 19248.8 |
| nadph-dependent curcumin reductase | SK85_01644 | P76113 | Positive | 1669462 - 1670499 | 37567.9 |
| hth-type transcriptional regulator mcbr | SK85_01645 | P76114 | Positive | 1670697 - 1671362 | 25169.0 |
| iron outer membrane transporter | SK85_01646 | P76115 | Negative | 1671398 - 1673500 | 77265.0 |
| hypothetical protein | SK85_01647 | P76116 | Positive | 1673742 - 1674803 | 38615.1 |
| l-asparagine permease | SK85_01648 | P77610 | Negative | 1674916 - 1676415 | 54236.3 |
| gst-like protein | SK85_01649 | P76117 | Positive | 1676682 - 1677299 | 23322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





