Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase, subunit e | SK85_01590 | P76081 | Positive | 1609130 - 1610200 | 39322.2 |
| 2,3-dehydroadipyl-coa hydratase | SK85_01591 | P76082 | Positive | 1610197 - 1610964 | 27239.0 |
| 1,2-epoxyphenylacetyl-coa isomerase | SK85_01592 | P77467 | Positive | 1610964 - 1611752 | 28406.3 |
| 3-hydroxyadipyl-coa dehydrogenase | SK85_01593 | P76083 | Positive | 1611799 - 1613181 | 50232.7 |
| acyl-coenzyme a thioesterase paai | SK85_01594 | P76084 | Positive | 1613171 - 1613593 | 14851.6 |
| 3-oxoadipyl-coa/3-oxo-5,6-dehydrosuberyl-coa thiolase | SK85_01595 | P0C7L2 | Positive | 1613593 - 1614798 | 42279.2 |
| phenylacetate-coenzyme a ligase | SK85_01596 | P76085 | Positive | 1614825 - 1616138 | 48941.7 |
| transcriptional repressor paax | SK85_01597 | P76086 | Positive | 1616239 - 1617189 | 35296.7 |
| phenylacetic acid degradation protein paay | SK85_01598 | P77181 | Positive | 1617171 - 1617761 | 21325.9 |
| hypothetical protein | SK85_01599 | P25927 | Positive | 1618092 - 1624448 | 217323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





